Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2593 family protein | DTM10_14990 | Not Available | Negative | 2940252 - 2940740 | 18519.1 |
| spermidine/putrescine abc transporter permease | DTM10_14995 | Not Available | Negative | 2940800 - 2941645 | 30542.4 |
| putrescine abc transporter permease poth | DTM10_15000 | Not Available | Negative | 2941642 - 2942595 | 35523.7 |
| putrescine abc transporter atp-binding subunit potg | DTM10_15005 | Not Available | Negative | 2942605 - 2943738 | 41981.4 |
| putrescine-binding periplasmic protein | DTM10_15010 | Not Available | Negative | 2943833 - 2944945 | 40857.7 |
| putrescine/spermidine abc transporter substrate-binding protein | DTM10_15015 | Not Available | Negative | 2944929 - 2945090 | 6387.65 |
| ybjn domain-containing protein | DTM10_15020 | Not Available | Negative | 2945296 - 2945772 | 17667.1 |
| 30s ribosomal protein s6--l-glutamate ligase | DTM10_15025 | Not Available | Negative | 2945860 - 2946762 | 32438.5 |
| oxygen-insensitive nadph nitroreductase | DTM10_15030 | Not Available | Negative | 2946823 - 2947545 | 26908.2 |
| duf1418 family protein | DTM10_15035 | Not Available | Negative | 2947529 - 2947816 | 10518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





