Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf535 domain-containing protein | DTM10_14890 | Not Available | Positive | 2919883 - 2920875 | 38277.7 |
| duf2813 domain-containing protein | DTM10_14895 | Not Available | Negative | 2920872 - 2922530 | 63541.9 |
| aquaporin z | DTM10_14900 | Not Available | Positive | 2922955 - 2923650 | 23675.2 |
| hypothetical protein | DTM10_14905 | Not Available | Negative | 2923604 - 2923978 | 13452.2 |
| lysine exporter lyso family protein | DTM10_14910 | Not Available | Positive | 2924107 - 2925006 | 32342.2 |
| hydroxylamine reductase | DTM10_14915 | Not Available | Positive | 2925150 - 2926802 | 60051.3 |
| hybrid-cluster nad(p)-dependent oxidoreductase | DTM10_14920 | Not Available | Positive | 2926814 - 2927782 | 35713.8 |
| ubiquinone-dependent pyruvate dehydrogenase | DTM10_14925 | Not Available | Positive | 2927915 - 2929633 | 62016.9 |
| low-specificity l-threonine aldolase | DTM10_14930 | Not Available | Positive | 2929670 - 2930671 | 36456.8 |
| sdr family nad(p)-dependent oxidoreductase | DTM10_14935 | Not Available | Positive | 2930682 - 2932112 | 53725.2 |
Pathways
495 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





