Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding/permease cydd | DTM10_14835 | Not Available | Positive | 2907861 - 2909627 | 65017.9 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | DTM10_14840 | Not Available | Positive | 2909628 - 2911349 | 62872.1 |
| leucyl/phenylalanyl-trna--protein transferase | DTM10_14845 | Not Available | Positive | 2911391 - 2912095 | 26620.0 |
| translation initiation factor if-1 | DTM10_14850 | Not Available | Positive | 2912380 - 2912598 | 8250.1 |
| Trna-ser | Not Available | Not Available | Positive | 2912852 - 2912939 | Not Available |
| atp-dependent clp protease atp-binding subunit clpa | DTM10_14865 | Not Available | Negative | 2913463 - 2915739 | 84211.9 |
| atp-dependent clp protease adaptor clps | DTM10_14870 | Not Available | Negative | 2915770 - 2916090 | 12179.7 |
| cold-shock protein cspd | DTM10_14875 | Not Available | Positive | 2916413 - 2916637 | 7969.41 |
| macrolide abc transporter permease/atp-binding protein macb | DTM10_14880 | Not Available | Negative | 2916710 - 2918656 | 70650.7 |
| macrolide transporter subunit maca | DTM10_14885 | Not Available | Negative | 2918653 - 2919768 | 40773.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





