Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase, biosynthetic | DTM10_14655 | Not Available | Negative | 2869546 - 2871090 | 56199.5 |
| dihydroxy-acid dehydratase | DTM10_14660 | Not Available | Negative | 2871093 - 2872943 | 65525.4 |
| branched chain amino acid aminotransferase | DTM10_14665 | Not Available | Negative | 2873008 - 2873937 | 34095.6 |
| acetolactate synthase isozyme 2 small subunit | DTM10_14670 | Not Available | Negative | 2873957 - 2874220 | 9703.74 |
| acetolactate synthase 2 catalytic subunit | DTM10_14675 | Not Available | Negative | 2874217 - 2875863 | 59324.3 |
| hypothetical protein | DTM10_14680 | Not Available | Negative | 2875866 - 2875916 | 1910.25 |
| ilvgmeda operon leader peptide | DTM10_14685 | Not Available | Negative | 2876003 - 2876101 | 3231.32 |
| atp-dependent protease | DTM10_14695 | Not Available | Positive | 2876454 - 2877974 | 55218.6 |
| duf413 domain-containing protein | DTM10_14700 | Not Available | Negative | 2877999 - 2878337 | 13134.2 |
| transcriptional regulator | DTM10_14705 | Not Available | Positive | 2878456 - 2879295 | 31748.0 |
Pathways
505 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





