Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DTM10_14250 | Not Available | Positive | 2788013 - 2788642 | 22281.3 |
| tripartite tricarboxylate transporter substrate binding protein | DTM10_14255 | Not Available | Positive | 2788667 - 2789641 | 34209.4 |
| tripartite tricarboxylate transporter tctb family protein | DTM10_14260 | Not Available | Positive | 2789658 - 2790164 | 18051.8 |
| c4-dicarboxylate abc transporter permease | DTM10_14265 | Not Available | Positive | 2790177 - 2791667 | 51795.2 |
| uridine phosphorylase | DTM10_14270 | Not Available | Negative | 2791701 - 2792465 | 27288.8 |
| dienelactone hydrolase family protein | DTM10_14275 | Not Available | Positive | 2792727 - 2793536 | 29284.6 |
| cysteine hydrolase | DTM10_14280 | Not Available | Positive | 2793793 - 2794461 | 24079.1 |
| duf2877 domain-containing protein | DTM10_14285 | Not Available | Positive | 2794467 - 2795327 | 31954.4 |
| acyl-coa synthetase fdra | DTM10_14290 | Not Available | Positive | 2795422 - 2796981 | 54973.0 |
| duf1116 domain-containing protein | DTM10_14295 | Not Available | Positive | 2796978 - 2798402 | 50070.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





