Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antirestriction protein | DTM10_14150 | Not Available | Negative | 2768119 - 2768259 | 5379.54 |
| protoporphyrinogen oxidase | DTM10_14155 | Not Available | Negative | 2768380 - 2768925 | 21227.4 |
| trk system potassium uptake protein trkh | DTM10_14160 | Not Available | Negative | 2768937 - 2770388 | 52962.9 |
| impact family protein | DTM10_14165 | Not Available | Negative | 2770427 - 2771041 | 21720.1 |
| xaa-pro dipeptidase | DTM10_14170 | Not Available | Negative | 2771041 - 2772372 | 50178.9 |
| fatty acid oxidation complex subunit alpha fadb | DTM10_14175 | Not Available | Positive | 2772562 - 2774751 | 79684.7 |
| acetyl-coa c-acyltransferase fada | DTM10_14180 | Not Available | Positive | 2774761 - 2775924 | 40830.6 |
| nad(p)h-flavin reductase | DTM10_14185 | Not Available | Negative | 2776116 - 2776817 | 26243.5 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | DTM10_14190 | Not Available | Negative | 2776863 - 2778356 | 55606.8 |
| transcription/translation regulatory transformer protein rfah | DTM10_14195 | Not Available | Positive | 2778523 - 2779011 | 18341.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





