Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | DTM10_13105 | Not Available | Negative | 2557201 - 2558421 | 43849.6 |
| aminodeoxychorismate synthase component 2 | DTM10_13110 | Not Available | Negative | 2558507 - 2559070 | 20787.1 |
| putative adenosine monophosphate-protein transferase fic | DTM10_13115 | Not Available | Negative | 2559102 - 2559704 | 22988.4 |
| duf2559 family protein | DTM10_13120 | Not Available | Negative | 2559694 - 2559861 | 6668.12 |
| peptidylprolyl isomerase a | DTM10_13125 | Not Available | Negative | 2559966 - 2560538 | 20432.5 |
| mfs transporter | DTM10_13130 | Not Available | Positive | 2560809 - 2561990 | 43197.0 |
| nitrite reductase large subunit | DTM10_13135 | Not Available | Positive | 2562252 - 2564795 | 93142.6 |
| nitrite reductase small subunit | DTM10_13140 | Not Available | Positive | 2564792 - 2565118 | 12270.6 |
| nitrite transporter nirc | DTM10_13145 | Not Available | Positive | 2565244 - 2566050 | 28565.2 |
| siroheme synthase | DTM10_13150 | Not Available | Positive | 2566069 - 2567442 | 49980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





