Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | DTM10_12655 | Not Available | Negative | 2478761 - 2478820 | 2219.08 |
| d-3-phosphoglycerate dehydrogenase | DTM10_12660 | Not Available | Negative | 2479049 - 2480281 | 44178.4 |
| ribose-5-phosphate isomerase | DTM10_12665 | Not Available | Negative | 2480537 - 2481196 | 22861.8 |
| hypothetical protein | DTM10_12670 | Not Available | Negative | 2481252 - 2481437 | 6746.48 |
| chromosome initiation inhibitor | DTM10_12675 | Not Available | Positive | 2481578 - 2482471 | 33473.6 |
| methylmalonyl-coa mutase | DTM10_12680 | Not Available | Positive | 2482675 - 2484819 | 77869.7 |
| methylmalonyl co-a mutase-associated gtpase meab | DTM10_12685 | Not Available | Positive | 2484812 - 2485807 | 36688.2 |
| methylmalonyl-coa decarboxylase | DTM10_12690 | Not Available | Positive | 2485818 - 2486603 | 29174.3 |
| acetyl-coa hydrolase/transferase family protein | DTM10_12695 | Not Available | Positive | 2486627 - 2488105 | 53871.6 |
| lysr family transcriptional regulator | DTM10_12700 | Not Available | Negative | 2488102 - 2488998 | 34675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





