Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | DTM10_11480 | Not Available | Negative | 2255604 - 2256575 | 37008.6 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | DTM10_11485 | Not Available | Negative | 2256572 - 2257315 | 27792.3 |
| hypothetical protein | DTM10_11490 | Not Available | Negative | 2257356 - 2257751 | 15227.2 |
| duf72 domain-containing protein | DTM10_11495 | Not Available | Negative | 2257804 - 2258622 | 31534.9 |
| hydrolase | DTM10_11500 | Not Available | Negative | 2258619 - 2259185 | 20476.4 |
| aspartate--trna ligase | DTM10_11505 | Not Available | Positive | 2259495 - 2261267 | 65873.2 |
| nudix pyrophosphatase | DTM10_11510 | Not Available | Positive | 2261385 - 2261837 | 17292.6 |
| yebc/pmpr family dna-binding transcriptional regulator | DTM10_11515 | Not Available | Positive | 2261866 - 2262606 | 26438.1 |
| crossover junction endodeoxyribonuclease ruvc | DTM10_11520 | Not Available | Positive | 2262641 - 2263162 | 18747.9 |
| yebb family permuted papain-like enzyme | DTM10_11525 | Not Available | Negative | 2263164 - 2263766 | 22707.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





