Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | DTM10_10370 | Not Available | Negative | 2051788 - 2053869 | 76484.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | DTM10_10375 | Not Available | Negative | 2053875 - 2054564 | 25372.7 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | DTM10_10380 | Not Available | Negative | 2054571 - 2056679 | 79347.1 |
| dna-directed rna polymerase subunit omega | DTM10_10385 | Not Available | Negative | 2056698 - 2056973 | 10237.2 |
| guanylate kinase | DTM10_10390 | Not Available | Negative | 2057028 - 2057651 | 23594.1 |
| nad-dependent dna ligase ligb | DTM10_10395 | Not Available | Positive | 2057909 - 2059594 | 63415.2 |
| trimeric intracellular cation channel family protein | DTM10_10400 | Not Available | Negative | 2059591 - 2060208 | 22049.8 |
| yicc family protein | DTM10_10405 | Not Available | Negative | 2060460 - 2061323 | 33188.9 |
| hypothetical protein | DTM10_10410 | Not Available | Negative | 2061336 - 2061518 | 6633.33 |
| ribonuclease ph | DTM10_10415 | Not Available | Positive | 2061450 - 2062166 | 25313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





