Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isncy family transposase | DTM10_09385 | Not Available | Positive | 1864532 - 1865434 | 34843.6 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | DTM10_09390 | Not Available | Negative | 1865475 - 1866278 | 28912.7 |
| mfs transporter | DTM10_09395 | Not Available | Negative | 1866295 - 1867479 | 42182.3 |
| competence/damage-inducible protein cina | DTM10_09405 | Not Available | Negative | 1868124 - 1869326 | 44256.3 |
| hypothetical protein | DTM10_09410 | Not Available | Negative | 1869426 - 1869968 | 18596.8 |
| nucleoside triphosphatase nudi | DTM10_09415 | Not Available | Positive | 1870247 - 1870672 | 16371.6 |
| histidine phosphatase family protein | DTM10_09420 | Not Available | Negative | 1870711 - 1871313 | 22360.9 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | DTM10_09425 | Not Available | Positive | 1871621 - 1872760 | 41646.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DTM10_09430 | Not Available | Positive | 1872764 - 1873732 | 36254.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | DTM10_09435 | Not Available | Positive | 1873732 - 1875714 | 74281.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





