Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DTM10_06305 | Not Available | Positive | 1271039 - 1271302 | 9962.36 |
| trigger factor | DTM10_06310 | Not Available | Positive | 1271449 - 1272747 | 48195.4 |
| atp-dependent clp protease proteolytic subunit | DTM10_06315 | Not Available | Positive | 1272993 - 1273616 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | DTM10_06320 | Not Available | Positive | 1273742 - 1275016 | 46358.7 |
| lon protease | DTM10_06325 | Not Available | Positive | 1275204 - 1277558 | 87443.4 |
| dna-binding protein hu-beta | DTM10_06330 | Not Available | Positive | 1277767 - 1278039 | 9226.08 |
| peptidyl-prolyl cis-trans isomerase | DTM10_06335 | Not Available | Positive | 1278231 - 1280102 | 68153.7 |
| hypothetical protein | DTM10_06340 | Not Available | Positive | 1280253 - 1280624 | 12716.4 |
| thioesterase | DTM10_06345 | Not Available | Positive | 1280730 - 1281128 | 15120.3 |
| 7-cyano-7-deazaguanine synthase quec | DTM10_06350 | Not Available | Negative | 1281180 - 1281875 | 25453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





