Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | DTM10_05465 | Not Available | Negative | 1103342 - 1103671 | 11833.1 |
| hypothetical protein | DTM10_05470 | Not Available | Negative | 1103985 - 1104695 | 26579.6 |
| hypothetical protein | DTM10_05475 | Not Available | Negative | 1104664 - 1106307 | 59889.0 |
| usher protein ecpc | DTM10_05480 | Not Available | Negative | 1106297 - 1108822 | 91327.7 |
| fimbrial chaperone ecpb | DTM10_05485 | Not Available | Negative | 1108848 - 1109516 | 24502.3 |
| common pilus major fimbrillin subunit ecpa | DTM10_05490 | Not Available | Negative | 1109573 - 1110160 | 20098.4 |
| helix-turn-helix transcriptional regulator | DTM10_05495 | Not Available | Negative | 1110235 - 1110825 | 23300.1 |
| hypothetical protein | DTM10_05500 | Not Available | Negative | 1111230 - 1111454 | 8338.21 |
| hypothetical protein | DTM10_05505 | Not Available | Positive | 1111357 - 1111539 | 6273.92 |
| 50s ribosomal protein l36 | DTM10_05515 | Not Available | Negative | 1111861 - 1112001 | 5466.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





