Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | DTM10_05135 | Not Available | Positive | 1041112 - 1041564 | 16901.4 |
| hypothetical protein | DTM10_05140 | Not Available | Positive | 1041687 - 1043327 | 63479.4 |
| ornithine carbamoyltransferase | DTM10_05145 | Not Available | Negative | 1043456 - 1044469 | 37235.6 |
| regulator of ribonuclease activity b | DTM10_05150 | Not Available | Positive | 1044631 - 1045047 | 15603.5 |
| gnat family n-acetyltransferase | DTM10_05155 | Not Available | Negative | 1045093 - 1045596 | 18592.5 |
| duf898 domain-containing protein | DTM10_05160 | Not Available | Positive | 1045789 - 1046985 | 44932.2 |
| valine--trna ligase | DTM10_05165 | Not Available | Negative | 1047039 - 1049894 | 108227.0 |
| dna polymerase iii subunit chi | DTM10_05170 | Not Available | Negative | 1049894 - 1050337 | 16574.5 |
| cytosol aminopeptidase | DTM10_05175 | Not Available | Negative | 1050471 - 1051982 | 54897.1 |
| lps export abc transporter permease lptf | DTM10_05180 | Not Available | Positive | 1052249 - 1053349 | 40360.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





