Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DTM10_04930 | Not Available | Negative | 998843 - 999808 | 35167.5 |
| sdr family nad(p)-dependent oxidoreductase | DTM10_04935 | Not Available | Negative | 999916 - 1000776 | 29841.3 |
| transcriptional regulator | DTM10_04940 | Not Available | Positive | 1000865 - 1001245 | 14094.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | DTM10_04945 | Not Available | Negative | 1001362 - 1003305 | 70821.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DTM10_04950 | Not Available | Positive | 1003495 - 1004235 | 27191.4 |
| hypothetical protein | DTM10_04955 | Not Available | Negative | 1004353 - 1004532 | 7022.89 |
| hypothetical protein | DTM10_04960 | Not Available | Positive | 1004447 - 1005358 | 34878.3 |
| ytfj family protein | DTM10_04970 | Not Available | Negative | 1005448 - 1006002 | 20495.7 |
| duf1107 domain-containing protein | DTM10_04975 | Not Available | Positive | 1006327 - 1006533 | 8072.24 |
| hlyc/corc family transporter | DTM10_04980 | Not Available | Negative | 1006611 - 1007954 | 49765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





