Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DTM10_04415 | Not Available | Negative | 905935 - 907566 | 60554.4 |
| 4fe-4s mono-cluster protein yjdi | DTM10_04420 | Not Available | Positive | 907746 - 907976 | 8649.49 |
| n-acetyltransferase | DTM10_04425 | Not Available | Positive | 907988 - 908260 | 10469.6 |
| hypothetical protein | DTM10_04430 | Not Available | Positive | 908347 - 908562 | 8268.43 |
| endoribonuclease ghos | DTM10_04435 | Not Available | Positive | 908487 - 908783 | 11441.5 |
| ghot/ortt family toxin | DTM10_04440 | Not Available | Positive | 908811 - 908984 | 6555.44 |
| lysine--trna ligase | DTM10_04445 | Not Available | Negative | 909103 - 910620 | 57843.0 |
| mfs transporter | DTM10_04450 | Not Available | Negative | 910857 - 912314 | 52969.7 |
| lysine decarboxylase cada | DTM10_04455 | Not Available | Negative | 912373 - 914520 | 81250.7 |
| cadaverine/lysine antiporter | DTM10_04460 | Not Available | Negative | 914600 - 915934 | 46667.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





