Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paar domain-containing protein | DTM10_03990 | Not Available | Positive | 816158 - 817564 | 51780.9 |
| type vi secretion system baseplate subunit tssf | DTM10_04000 | Not Available | Positive | 818193 - 819953 | 67283.4 |
| type vi secretion system baseplate subunit tssg | DTM10_04005 | Not Available | Positive | 819917 - 820996 | 39368.6 |
| type vi secretion system lipoprotein tssj | DTM10_04010 | Not Available | Positive | 820977 - 821513 | 20531.9 |
| type vi secretion system baseplate subunit tsse | DTM10_04015 | Not Available | Positive | 821517 - 821945 | 16276.8 |
| type vi secretion system protein vasl | DTM10_04020 | Not Available | Positive | 821945 - 823321 | 51960.5 |
| phosphoglycerate dehydrogenase | DTM10_04025 | Not Available | Negative | 823620 - 824567 | 34519.9 |
| sis domain-containing protein | DTM10_04030 | Not Available | Negative | 824638 - 825234 | 20906.4 |
| putative c-s lyase | DTM10_04035 | Not Available | Negative | 825237 - 826412 | 44845.6 |
| pts glucose transporter subunit iibc | DTM10_04040 | Not Available | Negative | 826412 - 827992 | 57623.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





