Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | DTM10_03935 | Not Available | Positive | 799179 - 800516 | 49505.6 |
| dotu family type iv/vi secretion system protein | DTM10_03940 | Not Available | Positive | 800513 - 801178 | 25311.8 |
| ompa family protein | DTM10_03945 | Not Available | Positive | 801191 - 802843 | 60515.4 |
| hcp family type vi secretion system effector | DTM10_03950 | Not Available | Positive | 802901 - 803392 | 18637.8 |
| type vi secretion system tip protein vgrg | DTM10_03960 | Not Available | Positive | 806221 - 808701 | 91761.7 |
| n-acetylmuramoyl-l-alanine amidase | DTM10_03965 | Not Available | Positive | 808734 - 809387 | 24995.1 |
| hypothetical protein | DTM10_03970 | Not Available | Positive | 809397 - 809846 | 17577.5 |
| hypothetical protein | DTM10_03975 | Not Available | Positive | 809952 - 811166 | 44670.9 |
| type vi secretion protein vask | DTM10_03980 | Not Available | Positive | 811223 - 814549 | 124177.0 |
| type vi secretion system protein tssa | DTM10_03985 | Not Available | Positive | 814542 - 816152 | 59914.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





