Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional activator | DTM10_03875 | Not Available | Negative | 790319 - 791236 | 34403.4 |
| ygdi/ygdr family lipoprotein | DTM10_03880 | Not Available | Negative | 791587 - 791814 | 8174.67 |
| cysteine desulfurase csda | DTM10_03885 | Not Available | Positive | 792006 - 793211 | 43275.6 |
| sulfur acceptor protein csde | DTM10_03890 | Not Available | Positive | 793211 - 793654 | 15911.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | DTM10_03895 | Not Available | Negative | 793705 - 794511 | 28535.6 |
| murein transglycosylase a | DTM10_03905 | Not Available | Negative | 794938 - 796035 | 40441.0 |
| Trna-met | Not Available | Not Available | Positive | 796244 - 796320 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 796354 - 796430 | Not Available |
| type vi secretion system contractile sheath small subunit | DTM10_03925 | Not Available | Positive | 797062 - 797562 | 18638.3 |
| type vi secretion system contractile sheath large subunit | DTM10_03930 | Not Available | Positive | 797621 - 799159 | 58035.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





