Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flap endonuclease xni | DTM10_03825 | Not Available | Positive | 779724 - 780479 | 28164.8 |
| lactaldehyde reductase | DTM10_03830 | Not Available | Negative | 780534 - 781682 | 40545.8 |
| l-fuculose-phosphate aldolase | DTM10_03835 | Not Available | Negative | 781710 - 782357 | 23786.7 |
| l-fucose:h+ symporter permease | DTM10_03840 | Not Available | Positive | 782904 - 784220 | 47581.6 |
| l-fucose isomerase | DTM10_03845 | Not Available | Positive | 784253 - 786028 | 65007.4 |
| l-fuculokinase | DTM10_03850 | Not Available | Positive | 786137 - 787555 | 52231.6 |
| l-fucose mutarotase | DTM10_03855 | Not Available | Positive | 787557 - 787979 | 15474.0 |
| l-fucose operon activator | DTM10_03860 | Not Available | Positive | 788037 - 788768 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | DTM10_03865 | Not Available | Negative | 788812 - 789912 | 41907.5 |
| duf423 domain-containing protein | DTM10_03870 | Not Available | Negative | 789905 - 790300 | 14334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





