Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | DTM10_03775 | Not Available | Negative | 768077 - 769417 | 48929.4 |
| mfs transporter | DTM10_03780 | Not Available | Negative | 769419 - 770771 | 49145.0 |
| flavodoxin | DTM10_03785 | Not Available | Negative | 771206 - 771655 | 16298.1 |
| trna pseudouridine(65) synthase truc | DTM10_03790 | Not Available | Negative | 771673 - 772455 | 29652.5 |
| yqcc family protein | DTM10_03795 | Not Available | Negative | 772455 - 772784 | 12772.2 |
| protein syd | DTM10_03800 | Not Available | Negative | 773406 - 773951 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DTM10_03805 | Not Available | Positive | 774019 - 774867 | 32531.1 |
| log family protein ygdh | DTM10_03810 | Not Available | Positive | 774979 - 776343 | 50975.0 |
| haaap family serine/threonine permease | DTM10_03815 | Not Available | Positive | 776899 - 778188 | 46923.3 |
| l-serine ammonia-lyase | DTM10_03820 | Not Available | Positive | 778246 - 779613 | 48725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





