Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endonuclease cas1 | DTM10_03615 | Not Available | Negative | 727943 - 728866 | 33426.7 |
| type i-e crispr-associated protein cas6/cse3/case | DTM10_03620 | Not Available | Negative | 728863 - 729513 | 24756.7 |
| type i-e crispr-associated protein cas5/casd | DTM10_03625 | Not Available | Negative | 729495 - 730241 | 28621.0 |
| type i-e crispr-associated protein cas7/cse4/casc | DTM10_03630 | Not Available | Negative | 730252 - 731307 | 38389.7 |
| type i-e crispr-associated protein cse2/casb | DTM10_03635 | Not Available | Negative | 731322 - 731858 | 20687.6 |
| type i-e crispr-associated protein cse1/casa | DTM10_03640 | Not Available | Negative | 731855 - 733417 | 59066.6 |
| crispr-associated helicase/endonuclease cas3 | DTM10_03645 | Not Available | Negative | 733515 - 736172 | 100036.0 |
| type i toxin-antitoxin system hok family toxin | DTM10_03650 | Not Available | Negative | 736410 - 736562 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | DTM10_03660 | Not Available | Negative | 736826 - 737560 | 27991.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | DTM10_03665 | Not Available | Negative | 737634 - 739346 | 63949.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





