Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | DTM10_03415 | Not Available | Negative | 689649 - 690191 | 20329.4 |
| formate hydrogenlyase subunit 5 | DTM10_03420 | Not Available | Negative | 690201 - 691910 | 64984.1 |
| hydrogenase 3 membrane subunit | DTM10_03425 | Not Available | Negative | 691928 - 692851 | 33059.4 |
| formate hydrogenlyase subunit 3 | DTM10_03430 | Not Available | Negative | 692854 - 694680 | 64113.2 |
| 4fe-4s dicluster domain-containing protein | DTM10_03435 | Not Available | Negative | 694677 - 695288 | 21831.4 |
| formate hydrogenlyase regulatory protein hyca | DTM10_03440 | Not Available | Negative | 695413 - 695874 | 17627.9 |
| protein hypa | DTM10_03445 | Not Available | Positive | 696086 - 696436 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | DTM10_03450 | Not Available | Positive | 696440 - 697312 | 31566.8 |
| hydrogenase assembly protein hypc | DTM10_03455 | Not Available | Positive | 697303 - 697575 | 9732.58 |
| hydrogenase formation protein hypd | DTM10_03460 | Not Available | Positive | 697575 - 698696 | 41396.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





