Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline/glycine betaine abc transporter substrate-binding protein prox | DTM10_03215 | Not Available | Positive | 652602 - 653594 | 35952.3 |
| mfs transporter | DTM10_03220 | Not Available | Positive | 653786 - 654970 | 41734.0 |
| branched-chain amino acid abc transporter permease | DTM10_03225 | Not Available | Positive | 655094 - 655831 | 26095.1 |
| l-valine transporter subunit ygah | DTM10_03230 | Not Available | Positive | 655821 - 656156 | 12040.3 |
| transcriptional regulator | DTM10_03235 | Not Available | Positive | 656247 - 656777 | 20564.7 |
| multidrug export protein emra | DTM10_03240 | Not Available | Positive | 656904 - 658076 | 42724.5 |
| multidrug effux mfs transporter subunit emrb | DTM10_03245 | Not Available | Positive | 658093 - 659631 | 55627.7 |
| s-ribosylhomocysteine lyase | DTM10_03250 | Not Available | Negative | 659695 - 660210 | 19444.4 |
| glutamate--cysteine ligase | DTM10_03255 | Not Available | Negative | 660360 - 661916 | 58272.5 |
| deda family protein | DTM10_03260 | Not Available | Negative | 661989 - 662417 | 15590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





