Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase | DTM10_03115 | Not Available | Positive | 635452 - 636720 | 46083.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | DTM10_03120 | Not Available | Positive | 636743 - 638191 | 51743.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DTM10_03125 | Not Available | Positive | 638205 - 639485 | 45730.3 |
| gaba permease | DTM10_03130 | Not Available | Positive | 639723 - 641123 | 51115.1 |
| dna-binding transcriptional regulator csir | DTM10_03135 | Not Available | Positive | 641144 - 641806 | 25078.4 |
| peptidoglycan-binding protein lysm | DTM10_03140 | Not Available | Negative | 641807 - 642256 | 16064.0 |
| yqae/pmp3 family membrane protein | DTM10_03145 | Not Available | Negative | 642340 - 642498 | 5865.57 |
| transcriptional regulator | DTM10_03150 | Not Available | Positive | 642681 - 642980 | 10596.9 |
| rhodanese-like domain-containing protein ygap | DTM10_03155 | Not Available | Positive | 642990 - 643514 | 18690.0 |
| dna-binding protein stpa | DTM10_03160 | Not Available | Negative | 643561 - 643965 | 15359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





