Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DTM10_03015 | Not Available | Positive | 620199 - 621425 | 45938.1 |
| ompa family protein | DTM10_03020 | Not Available | Positive | 621441 - 621923 | 17241.5 |
| 50s ribosomal protein l19 | DTM10_03025 | Not Available | Negative | 622000 - 622347 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DTM10_03030 | Not Available | Negative | 622389 - 623156 | 28424.0 |
| ribosome maturation factor rimm | DTM10_03035 | Not Available | Negative | 623187 - 623735 | 20606.6 |
| 30s ribosomal protein s16 | DTM10_03040 | Not Available | Negative | 623754 - 624002 | 9191.08 |
| signal recognition particle protein | DTM10_03045 | Not Available | Negative | 624251 - 625612 | 49790.5 |
| inner membrane protein ypjd | DTM10_03050 | Not Available | Positive | 625779 - 626570 | 29312.0 |
| duf21 domain-containing protein | DTM10_03055 | Not Available | Positive | 626636 - 627877 | 46353.9 |
| nucleotide exchange factor grpe | DTM10_03060 | Not Available | Negative | 627932 - 628525 | 21799.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





