Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | DTM10_02960 | Not Available | Negative | 611406 - 612386 | 37110.8 |
| outer membrane protein assembly factor bamd | DTM10_02965 | Not Available | Positive | 612521 - 613258 | 27812.8 |
| hypothetical protein | DTM10_02975 | Not Available | Positive | 614729 - 614935 | 7922.89 |
| ribosome-associated inhibitor a | DTM10_02980 | Not Available | Positive | 614970 - 615311 | 12785.3 |
| hypothetical protein | DTM10_02985 | Not Available | Positive | 615415 - 615462 | 1912.35 |
| bifunctional chorismate mutase/prephenate dehydratase | DTM10_02990 | Not Available | Positive | 615561 - 616721 | 43090.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | DTM10_02995 | Not Available | Negative | 616764 - 617885 | 42040.0 |
| 3-deoxy-7-phosphoheptulonate synthase arof | DTM10_03000 | Not Available | Negative | 617896 - 618966 | 38820.3 |
| duf2799 domain-containing protein | DTM10_03005 | Not Available | Positive | 619176 - 619541 | 13222.3 |
| duf4154 domain-containing protein | DTM10_03010 | Not Available | Positive | 619691 - 620209 | 18979.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





