Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaef family permuted papain-like enzyme | DTM10_02910 | Not Available | Negative | 600072 - 600896 | 30003.0 |
| proline--trna ligase | DTM10_02915 | Not Available | Negative | 600949 - 602667 | 63606.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DTM10_02920 | Not Available | Negative | 602778 - 603485 | 26378.9 |
| rcs stress response system protein rcsf | DTM10_02925 | Not Available | Negative | 603482 - 603886 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | DTM10_02930 | Not Available | Negative | 604004 - 604819 | 29433.3 |
| methionine abc transporter | DTM10_02935 | Not Available | Negative | 604859 - 605512 | 23287.7 |
| d-methionine abc transporter, atp-binding protein | DTM10_02940 | Not Available | Negative | 605505 - 606536 | 37864.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | DTM10_02945 | Not Available | Positive | 606724 - 607296 | 21125.2 |
| atp-dependent chaperone clpb | DTM10_02950 | Not Available | Negative | 607975 - 610548 | 95604.9 |
| peptidoglycan editing factor pgef | DTM10_02955 | Not Available | Negative | 610678 - 611409 | 26372.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





