Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | DS966_15580 | Not Available | Negative | 3114689 - 3115543 | 32470.6 |
| abc transporter permease | DS966_15585 | Not Available | Negative | 3115788 - 3116846 | 38545.9 |
| cell division atp-binding protein ftse | DS966_15590 | Not Available | Negative | 3116839 - 3117507 | 24440.8 |
| signal recognition particle-docking protein ftsy | DS966_15595 | Not Available | Negative | 3117510 - 3119006 | 54617.3 |
| ribosomal rna small subunit methyltransferase d | DS966_15600 | Not Available | Positive | 3119156 - 3119752 | 21678.8 |
| duf1145 family protein | DS966_15605 | Not Available | Positive | 3119742 - 3120011 | 10280.4 |
| duf2500 domain-containing protein | DS966_15610 | Not Available | Negative | 3120014 - 3120373 | 13509.4 |
| lysoplasmalogenase | DS966_15615 | Not Available | Positive | 3120514 - 3121140 | 23791.9 |
| zinc/cadmium/mercury/lead-transporting atpase | DS966_15620 | Not Available | Positive | 3121214 - 3123412 | 76774.3 |
| sulfurtransferase tusa | DS966_15625 | Not Available | Negative | 3123681 - 3123926 | 9095.09 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





