Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | DS966_15120 | Not Available | Negative | 3015292 - 3016518 | 44528.1 |
| yhfx family plp-dependent enzyme | DS966_15125 | Not Available | Negative | 3016519 - 3017682 | 42497.7 |
| prd domain-containing protein | DS966_15130 | Not Available | Negative | 3017766 - 3018128 | 13515.4 |
| hypothetical protein | DS966_15135 | Not Available | Negative | 3018145 - 3019050 | 33556.5 |
| tryptophan--trna ligase | DS966_15140 | Not Available | Negative | 3019212 - 3020216 | 37425.9 |
| phosphoglycolate phosphatase | DS966_15145 | Not Available | Negative | 3020209 - 3020967 | 27389.8 |
| ribulose-phosphate 3-epimerase | DS966_15150 | Not Available | Negative | 3020960 - 3021637 | 24555.7 |
| adenine-specific dna-methyltransferase | DS966_15155 | Not Available | Negative | 3021655 - 3022491 | 32087.2 |
| cell division protein damx | DS966_15160 | Not Available | Negative | 3022598 - 3023884 | 46046.2 |
| 3-dehydroquinate synthase | DS966_15165 | Not Available | Negative | 3023976 - 3025064 | 38856.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





