Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DS966_15070 | Not Available | Positive | 3004475 - 3005656 | 43169.0 |
| nitrite reductase large subunit | DS966_15075 | Not Available | Positive | 3005918 - 3008461 | 93112.6 |
| nitrite reductase small subunit | DS966_15080 | Not Available | Positive | 3008458 - 3008784 | 12270.6 |
| nitrite transporter nirc | DS966_15085 | Not Available | Positive | 3008916 - 3009722 | 28565.2 |
| siroheme synthase | DS966_15090 | Not Available | Positive | 3009741 - 3011114 | 49980.4 |
| duf4223 domain-containing protein | DS966_15095 | Not Available | Positive | 3011366 - 3011533 | 5819.16 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DS966_15100 | Not Available | Negative | 3011640 - 3012725 | 38632.9 |
| hypothetical protein | DS966_15105 | Not Available | Negative | 3012737 - 3014041 | 46433.2 |
| duf2620 domain-containing protein | DS966_15110 | Not Available | Negative | 3014053 - 3014406 | 12479.5 |
| phosphotriesterase-related protein | DS966_15115 | Not Available | Negative | 3014417 - 3015295 | 32843.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





