Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DS966_14860 | Not Available | Negative | 2973854 - 2974072 | 8237.33 |
| hypothetical protein | DS966_14870 | Not Available | Negative | 2975395 - 2975643 | 9627.75 |
| regulatory protein arir | DS966_14875 | Not Available | Negative | 2975756 - 2976022 | 9696.56 |
| two-component-system connector protein ymga | DS966_14880 | Not Available | Negative | 2976051 - 2976323 | 10318.5 |
| two-component-system connector protein ycgz | DS966_14885 | Not Available | Negative | 2976366 - 2976602 | 8694.37 |
| eal domain-containing protein | DS966_14890 | Not Available | Positive | 2976916 - 2978127 | 45347.6 |
| helix-turn-helix-type transcriptional regulator | DS966_14895 | Not Available | Positive | 2978332 - 2979063 | 28261.2 |
| duf1398 domain-containing protein | DS966_14900 | Not Available | Positive | 2979284 - 2979688 | 15823.0 |
| isocitrate dehydrogenase | DS966_14905 | Not Available | Negative | 2979950 - 2980102 | 5511.76 |
| hypothetical protein | DS966_14910 | Not Available | Negative | 2980296 - 2980451 | 5916.19 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





