Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cation transport regulator chab | DS966_14525 | Not Available | Negative | 2921031 - 2921261 | 9000.27 |
| sodium-potassium/proton antiporter chaa | DS966_14530 | Not Available | Positive | 2921531 - 2922631 | 39166.9 |
| small toxic polypeptide ldra/ldrc | DS966_14535 | Not Available | Positive | 2923041 - 2923148 | 3951.94 |
| 3-deoxy-8-phosphooctulonate synthase | DS966_14540 | Not Available | Negative | 2923297 - 2924151 | 30834.5 |
| tetratricopeptide repeat-containing protein | DS966_14545 | Not Available | Negative | 2924187 - 2924996 | 30857.1 |
| sirb family protein | DS966_14550 | Not Available | Negative | 2925000 - 2925392 | 14654.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | DS966_14555 | Not Available | Negative | 2925389 - 2926222 | 30964.7 |
| peptide chain release factor 1 | DS966_14560 | Not Available | Negative | 2926222 - 2927304 | 40519.6 |
| glutamyl-trna reductase | DS966_14565 | Not Available | Negative | 2927346 - 2928602 | 46330.4 |
| outer membrane lipoprotein lolb | DS966_14570 | Not Available | Positive | 2928816 - 2929439 | 23602.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





