Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein h-ns | DS966_14420 | Not Available | Positive | 2899789 - 2900202 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase | DS966_14425 | Not Available | Negative | 2900346 - 2901254 | 32944.2 |
| two-component system response regulator rssb | DS966_14430 | Not Available | Negative | 2901456 - 2902469 | 37295.5 |
| patatin family protein | DS966_14435 | Not Available | Negative | 2902561 - 2903466 | 33041.0 |
| ychj family protein | DS966_14440 | Not Available | Positive | 2903579 - 2904037 | 16901.2 |
| formyltetrahydrofolate deformylase | DS966_14445 | Not Available | Positive | 2904087 - 2904929 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 2905089 - 2905173 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2905208 - 2905292 | Not Available |
| is4 family transposase | DS966_14465 | Not Available | Positive | 2905725 - 2906924 | 45808.8 |
| respiratory nitrate reductase subunit gamma | DS966_14470 | Not Available | Negative | 2906977 - 2907654 | 25484.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





