Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DS966_13820 | Not Available | Positive | 2785561 - 2785827 | 9943.65 |
| hypothetical protein | DS966_13825 | Not Available | Negative | 2786216 - 2786395 | 6739.69 |
| integrase | DS966_13835 | Not Available | Positive | 2787161 - 2787412 | 9680.6 |
| trna 2-thiocytidine(32) synthetase ttca | DS966_13840 | Not Available | Positive | 2787464 - 2788399 | 35489.9 |
| atp-dependent rna helicase dbpa | DS966_13845 | Not Available | Negative | 2788528 - 2789901 | 49214.7 |
| hypothetical protein | DS966_13850 | Not Available | Negative | 2789931 - 2790104 | 6408.82 |
| zinc transporter zntb | DS966_13855 | Not Available | Negative | 2790379 - 2791362 | 36614.3 |
| sensor domain-containing diguanylate cyclase | DS966_13860 | Not Available | Positive | 2791617 - 2792849 | 46483.9 |
| dna endonuclease smra | DS966_13865 | Not Available | Negative | 2792870 - 2793433 | 21545.8 |
| drug resistance transporter emrb/qaca subfamily protein | DS966_13870 | Not Available | Negative | 2793628 - 2794026 | 14310.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





