Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large chain | DS966_13660 | Not Available | Negative | 2752078 - 2755299 | 117907.0 |
| carbamoyl-phosphate synthase small subunit | DS966_13665 | Not Available | Negative | 2755317 - 2756465 | 41417.4 |
| hypothetical protein | DS966_13670 | Not Available | Negative | 2756618 - 2756815 | 7566.71 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DS966_13675 | Not Available | Negative | 2756921 - 2757742 | 28772.4 |
| duf805 domain-containing protein | DS966_13680 | Not Available | Negative | 2757903 - 2758268 | 13617.9 |
| non-specific ribonucleoside hydrolase rihc | DS966_13685 | Not Available | Negative | 2758291 - 2759205 | 32601.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DS966_13690 | Not Available | Negative | 2759271 - 2760221 | 34721.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DS966_13695 | Not Available | Negative | 2760223 - 2760672 | 16081.9 |
| lipoprotein signal peptidase | DS966_13700 | Not Available | Negative | 2760780 - 2761274 | 18129.3 |
| isoleucine--trna ligase | DS966_13705 | Not Available | Negative | 2761274 - 2764090 | 104358.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





