Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein fixb | DS966_13610 | Not Available | Negative | 2741956 - 2742897 | 33514.0 |
| protein fixa | DS966_13615 | Not Available | Negative | 2742912 - 2743682 | 27173.3 |
| l-carnitine/gamma-butyrobetaine antiporter | DS966_13620 | Not Available | Positive | 2744155 - 2745669 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | DS966_13625 | Not Available | Positive | 2745700 - 2746842 | 42560.8 |
| l-carnitine coa-transferase | DS966_13630 | Not Available | Positive | 2746970 - 2748187 | 45055.3 |
| atp-dependent acyl-coa ligase | DS966_13635 | Not Available | Positive | 2748260 - 2749813 | 58594.5 |
| carnitinyl-coa dehydratase | DS966_13640 | Not Available | Positive | 2749922 - 2750707 | 28177.8 |
| carnitine operon protein caie | DS966_13645 | Not Available | Positive | 2750713 - 2751303 | 21160.6 |
| carnitine metabolism transcriptional regulator caif | DS966_13650 | Not Available | Negative | 2751422 - 2751817 | 15363.0 |
| hypothetical protein | DS966_13655 | Not Available | Positive | 2751852 - 2752070 | 8154.88 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





