Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | DS966_13510 | Not Available | Positive | 2718656 - 2720158 | 56115.2 |
| l-ribulose-5-phosphate 4-epimerase | DS966_13515 | Not Available | Positive | 2720358 - 2721053 | 25428.3 |
| dna polymerase ii | DS966_13520 | Not Available | Positive | 2721128 - 2723479 | 90043.7 |
| rna polymerase-associated protein rapa | DS966_13525 | Not Available | Positive | 2723644 - 2726550 | 109776.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | DS966_13530 | Not Available | Positive | 2726562 - 2727221 | 24862.1 |
| dnaj-like protein djla | DS966_13535 | Not Available | Negative | 2727371 - 2728186 | 30567.2 |
| lps assembly protein lptd | DS966_13540 | Not Available | Positive | 2728441 - 2730795 | 89642.9 |
| chaperone sura | DS966_13545 | Not Available | Positive | 2730848 - 2732134 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DS966_13550 | Not Available | Positive | 2732134 - 2733123 | 35323.1 |
| ribosomal rna small subunit methyltransferase a | DS966_13555 | Not Available | Positive | 2733120 - 2733941 | 30363.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





