Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | DS966_13255 | Not Available | Negative | 2667224 - 2667775 | 20548.2 |
| carboxylating nicotinate-nucleotide diphosphorylase | DS966_13260 | Not Available | Positive | 2667863 - 2668756 | 32774.0 |
| hypothetical protein | DS966_13265 | Not Available | Negative | 2668753 - 2668947 | 7169.45 |
| prepilin peptidase-dependent protein d | DS966_13270 | Not Available | Positive | 2668960 - 2669400 | 15635.7 |
| type ii secretion system protein gspe | DS966_13275 | Not Available | Positive | 2669410 - 2670795 | 50635.4 |
| type iv pilin biogenesis protein | DS966_13280 | Not Available | Positive | 2670785 - 2671987 | 44320.1 |
| guanosine monophosphate reductase | DS966_13285 | Not Available | Negative | 2672022 - 2673065 | 37371.8 |
| dephospho-coa kinase | DS966_13290 | Not Available | Positive | 2673290 - 2673910 | 22623.0 |
| cell division protein zapd | DS966_13295 | Not Available | Positive | 2673910 - 2674653 | 28279.3 |
| dna gyrase inhibitor yacg | DS966_13300 | Not Available | Positive | 2674663 - 2674860 | 7306.49 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





