Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DS966_13100 | Not Available | Negative | 2635745 - 2635948 | 7613.28 |
| aspartate 1-decarboxylase | DS966_13105 | Not Available | Positive | 2635898 - 2636278 | 13834.5 |
| polysaccharide deacetylase family protein | DS966_13110 | Not Available | Negative | 2636282 - 2637511 | 46353.0 |
| pts sugar transporter subunit iia | DS966_13115 | Not Available | Negative | 2637575 - 2638015 | 16493.9 |
| inner membrane transport permease yadh | DS966_13120 | Not Available | Negative | 2638120 - 2638890 | 28517.9 |
| abc transporter atp-binding protein | DS966_13125 | Not Available | Negative | 2638887 - 2639813 | 34679.2 |
| carbonic anhydrase | DS966_13130 | Not Available | Positive | 2639922 - 2640584 | 25098.2 |
| hypoxanthine phosphoribosyltransferase | DS966_13135 | Not Available | Negative | 2640625 - 2641161 | 20116.4 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | DS966_13140 | Not Available | Positive | 2641367 - 2643757 | 86769.1 |
| multicopper oxidase cueo | DS966_13145 | Not Available | Negative | 2644022 - 2645572 | 56701.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





