Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | DS966_13045 | Not Available | Positive | 2625679 - 2626269 | 20256.9 |
| fimbrial chaperone | DS966_13050 | Not Available | Positive | 2626378 - 2627118 | 26709.8 |
| fimbrial protein | DS966_13060 | Not Available | Positive | 2629756 - 2630328 | 20281.1 |
| fimbrial-like protein yadl | DS966_13065 | Not Available | Positive | 2630340 - 2630948 | 20917.9 |
| fimbrial protein staf | DS966_13070 | Not Available | Positive | 2630975 - 2631571 | 21057.0 |
| fimbrial-like adhesin | DS966_13075 | Not Available | Positive | 2631597 - 2632889 | 46912.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DS966_13080 | Not Available | Positive | 2633001 - 2633795 | 28179.1 |
| pantoate--beta-alanine ligase | DS966_13085 | Not Available | Positive | 2633807 - 2634658 | 31610.6 |
| rpn family recombination-promoting nuclease/putative transposase | DS966_13090 | Not Available | Negative | 2634740 - 2635624 | 33959.0 |
| hypothetical protein | DS966_13095 | Not Available | Positive | 2635605 - 2635805 | 7564.43 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





