Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | DS966_12995 | Not Available | Negative | 2612088 - 2612885 | 28898.2 |
| ferrichrome porin fhua | DS966_13000 | Not Available | Negative | 2612936 - 2615194 | 82839.3 |
| bifunctional glycosyl transferase/transpeptidase | DS966_13005 | Not Available | Negative | 2615414 - 2617942 | 94093.8 |
| atp-dependent helicase hrpb | DS966_13010 | Not Available | Negative | 2618036 - 2620465 | 89333.4 |
| rna 2',3'-cyclic phosphodiesterase | DS966_13015 | Not Available | Positive | 2620539 - 2621069 | 19970.1 |
| dna/rna nuclease sfsa | DS966_13020 | Not Available | Positive | 2621084 - 2621788 | 26180.2 |
| rna polymerase-binding transcription factor dksa | DS966_13025 | Not Available | Positive | 2621966 - 2622421 | 17528.7 |
| glutamyl-q trna(asp) synthetase | DS966_13030 | Not Available | Positive | 2622458 - 2623384 | 34925.6 |
| polynucleotide adenylyltransferase pcnb | DS966_13035 | Not Available | Positive | 2623423 - 2624841 | 54659.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DS966_13040 | Not Available | Positive | 2624838 - 2625317 | 17843.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





