Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease degp | DS966_12940 | Not Available | Negative | 2600478 - 2601902 | 49342.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | DS966_12950 | Not Available | Negative | 2602032 - 2603549 | 59377.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | DS966_12955 | Not Available | Positive | 2603633 - 2604331 | 24427.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | DS966_12960 | Not Available | Positive | 2604324 - 2605124 | 29386.4 |
| hypothetical protein | DS966_12965 | Not Available | Positive | 2605162 - 2605785 | 22129.1 |
| iron-sulfur cluster insertion protein erpa | DS966_12970 | Not Available | Negative | 2605832 - 2606176 | 12101.2 |
| clc family h(+)/cl(-) exchange transporter | DS966_12975 | Not Available | Negative | 2606258 - 2607679 | 50407.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | DS966_12980 | Not Available | Positive | 2607904 - 2609184 | 45415.7 |
| fe(3+)-hydroxamate abc transporter permease fhub | DS966_12985 | Not Available | Negative | 2609219 - 2611201 | 70428.6 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | DS966_12990 | Not Available | Negative | 2611198 - 2612088 | 33051.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





