Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis/adhesion lipoprotein nlpe | DS966_12785 | Not Available | Negative | 2567827 - 2568537 | 25817.7 |
| aminoacyl-trna hydrolase | DS966_12790 | Not Available | Negative | 2568551 - 2568973 | 15611.9 |
| hypothetical protein | DS966_12795 | Not Available | Negative | 2568970 - 2569515 | 20847.7 |
| hypothetical protein | DS966_12800 | Not Available | Positive | 2569681 - 2569881 | 7214.59 |
| rho-binding antiterminator | DS966_12805 | Not Available | Positive | 2569874 - 2570128 | 9422.12 |
| trna lysidine(34) synthetase tils | DS966_12810 | Not Available | Negative | 2570162 - 2571475 | 48435.4 |
| voc family protein | DS966_12815 | Not Available | Negative | 2571540 - 2571929 | 14739.5 |
| lysine decarboxylase ldcc | DS966_12820 | Not Available | Negative | 2571986 - 2574127 | 80600.8 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DS966_12825 | Not Available | Negative | 2574225 - 2575184 | 35243.6 |
| dna polymerase iii subunit alpha | DS966_12830 | Not Available | Negative | 2575197 - 2578679 | 129914.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





