Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system yeeu family antitoxin | DS966_12735 | Not Available | Negative | 2559403 - 2559771 | 13524.2 |
| duf987 domain-containing protein | DS966_12740 | Not Available | Negative | 2559934 - 2560155 | 8454.23 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | DS966_12745 | Not Available | Negative | 2560447 - 2561019 | 21125.2 |
| methionine import atp-binding protein metn | DS966_12750 | Not Available | Positive | 2561207 - 2562238 | 37804.7 |
| methionine abc transporter | DS966_12755 | Not Available | Positive | 2562231 - 2562884 | 23257.6 |
| methionine abc transporter substrate-binding protein metq | DS966_12760 | Not Available | Positive | 2562924 - 2563739 | 29419.2 |
| rcs stress response system protein rcsf | DS966_12765 | Not Available | Positive | 2563857 - 2564261 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DS966_12770 | Not Available | Positive | 2564258 - 2564965 | 26379.8 |
| proline--trna ligase | DS966_12775 | Not Available | Positive | 2565076 - 2566794 | 63592.2 |
| yaef family permuted papain-like enzyme | DS966_12780 | Not Available | Positive | 2566847 - 2567671 | 29975.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





