Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspl | DS966_12630 | Not Available | Positive | 2537484 - 2538662 | 44332.5 |
| type ii secretion system protein | DS966_12635 | Not Available | Positive | 2538664 - 2539200 | 20332.6 |
| abc transporter permease | DS966_12640 | Not Available | Positive | 2540199 - 2541035 | 31803.3 |
| polysialic acid transport atp-binding protein kpst | DS966_12645 | Not Available | Positive | 2541032 - 2541691 | 24940.1 |
| shikimate dehydrogenase | DS966_12650 | Not Available | Positive | 2541741 - 2542364 | 22715.6 |
| n-acetylneuraminate synthase | DS966_12655 | Not Available | Positive | 2542361 - 2543401 | 38753.8 |
| acylneuraminate cytidylyltransferase | DS966_12660 | Not Available | Positive | 2543401 - 2544657 | 48623.9 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | DS966_12665 | Not Available | Positive | 2544654 - 2545829 | 44213.1 |
| neue protein | DS966_12670 | Not Available | Positive | 2545822 - 2546970 | 44929.3 |
| poly-alpha-2,8 sialosyl sialyltransferase | DS966_12675 | Not Available | Positive | 2546960 - 2548189 | 47505.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





