Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00645 family protein | DS966_12375 | Not Available | Positive | 2485120 - 2485614 | 18656.3 |
| l-glyceraldehyde 3-phosphate reductase | DS966_12380 | Not Available | Negative | 2485654 - 2486694 | 38872.4 |
| dienelactone hydrolase family protein | DS966_12385 | Not Available | Positive | 2486812 - 2487738 | 34147.6 |
| duf2623 domain-containing protein | DS966_12390 | Not Available | Positive | 2487857 - 2488144 | 10946.1 |
| hypothetical protein | DS966_12395 | Not Available | Positive | 2488141 - 2488326 | 6965.43 |
| hydrogenase 2 small subunit | DS966_12400 | Not Available | Positive | 2488333 - 2489451 | 39682.3 |
| hydrogenase 2 operon protein hyba | DS966_12405 | Not Available | Positive | 2489454 - 2490440 | 36014.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | DS966_12410 | Not Available | Positive | 2490430 - 2491608 | 43618.7 |
| hydrogenase 2 large subunit | DS966_12415 | Not Available | Positive | 2491605 - 2493308 | 62464.5 |
| hyad/hybd family hydrogenase maturation endopeptidase | DS966_12420 | Not Available | Positive | 2493308 - 2493802 | 17739.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





