Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | DS966_12055 | Not Available | Negative | 2422409 - 2422468 | 2241.07 |
| hypothetical protein | DS966_12060 | Not Available | Positive | 2422449 - 2422646 | 7092.56 |
| flotillin family protein | DS966_12065 | Not Available | Negative | 2422708 - 2424369 | 60711.1 |
| duf1449 family protein | DS966_12070 | Not Available | Negative | 2424396 - 2425025 | 23028.3 |
| glycogen synthase | DS966_12080 | Not Available | Positive | 2425295 - 2425495 | 7922.34 |
| hypothetical protein | DS966_12085 | Not Available | Negative | 2425530 - 2425889 | 13926.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DS966_12090 | Not Available | Positive | 2426203 - 2426856 | 23340.8 |
| pilus assembly protein | DS966_12095 | Not Available | Negative | 2426910 - 2427959 | 39311.2 |
| fimbrial biogenesis outer membrane usher protein | DS966_12105 | Not Available | Negative | 2428711 - 2431233 | 93562.2 |
| fimbrial-like protein | DS966_12110 | Not Available | Negative | 2431320 - 2431883 | 19716.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





