Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter tdcc | DS966_11620 | Not Available | Positive | 2342683 - 2344014 | 48895.8 |
| propionate kinase | DS966_11625 | Not Available | Positive | 2344040 - 2345248 | 43427.8 |
| formate c-acetyltransferase | DS966_11630 | Not Available | Positive | 2345282 - 2347576 | 85976.5 |
| reactive intermediate/imine deaminase | DS966_11635 | Not Available | Positive | 2347590 - 2347979 | 14008.0 |
| l-serine ammonia-lyase | DS966_11640 | Not Available | Positive | 2348051 - 2349415 | 48534.6 |
| transporter | DS966_11650 | Not Available | Positive | 2349693 - 2351024 | 48331.6 |
| serine dehydratase subunit alpha family protein | DS966_11655 | Not Available | Positive | 2351052 - 2352362 | 45336.8 |
| hypothetical protein | DS966_11660 | Not Available | Negative | 2352496 - 2352660 | 5935.07 |
| pirin family protein | DS966_11665 | Not Available | Negative | 2352683 - 2353384 | 25941.0 |
| lysr family transcriptional regulator | DS966_11670 | Not Available | Positive | 2353489 - 2354385 | 33231.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





