Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC251 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314825 bp
Thymine Count
1310239 bp
Guanine Count
1330321 bp
Cytosine Count
1350430 bp
Genome Length
5306298 bp
Protein-coding Genes
5020 genes
Non-Coding Genes
356 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system yhav family toxin | DS966_11560 | Not Available | Negative | 2331951 - 2332415 | 17778.0 |
| antitoxin prlf | DS966_11565 | Not Available | Negative | 2332415 - 2332750 | 12322.6 |
| galactarate dehydratase | DS966_11570 | Not Available | Negative | 2332899 - 2334470 | 56336.9 |
| mfs transporter | DS966_11575 | Not Available | Positive | 2334845 - 2336179 | 49030.1 |
| 5-keto-4-deoxy-d-glucarate aldolase | DS966_11580 | Not Available | Positive | 2336195 - 2336965 | 27400.6 |
| 2-hydroxy-3-oxopropionate reductase | DS966_11585 | Not Available | Positive | 2336995 - 2337885 | 30645.6 |
| glycerate 2-kinase | DS966_11590 | Not Available | Positive | 2337982 - 2339127 | 39030.6 |
| dna-binding transcriptional activator tdcr | DS966_11600 | Not Available | Negative | 2340102 - 2340446 | 13484.2 |
| transcriptional regulator tdca | DS966_11605 | Not Available | Positive | 2340635 - 2341573 | 34598.9 |
| serine/threonine dehydratase | DS966_11615 | Not Available | Positive | 2341672 - 2342661 | 35234.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





